Package index • BLASTr

All functions

check_bin(): Check CLI Tool

check_cmd(): Check if Commands Are Available otherwise create conda environments for each tools

get_blast_results(): Run BLASTn

get_fasta_header(): Get header from SubjectID

get_tax_by_taxID(): Get taxonomy ranks using NCBI Taxonomy Tax ID

install_dependencies(): Install Dependencies on Conda Environments

parallel_blast(): Run BLAST on parallel

parallel_get_tax(): Get taxonomy ranks for a list of NCBI Taxonomy Tax ID

parse_fasta(): Parsing fasta file to sequences only

run_blast(): Run BLAST