Package index • BLASTr

All functions

check_cmd(): Determine if a Command is Available and Install if Necessary

get_blast_results(): Run BLASTn

get_fasta_header(): Get header from SubjectID

get_tax_by_taxID(): Retrieve Taxonomic Ranks Using NCBI Taxonomy Tax IDs

install_dependencies(): Install Required Command-line Tool Dependencies

make_blast_db(): Make BLAST Database

parallel_blast(): Run BLAST on parallel

parallel_get_tax(): Retrieve Taxonomic Ranks for a List of NCBI Taxonomy Tax IDs in Parallel

parse_fasta(): Parsing fasta file to sequences only

run_blast(): Run BLAST